Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm12137-201ENSMUST00000119565 346 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm24937-201ENSMUST00000122597 134 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm25979-201ENSMUST00000157177 138 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm23642-201ENSMUST00000157858 258 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm28900-201ENSMUST00000185232 156 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm44727-201ENSMUST00000204225 451 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm5374-201ENSMUST00000222868 657 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm22806-201ENSMUST00000082738 136 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.39□□□□□ -2.03
Trub1Q8C0D0 Gm13581-201ENSMUST00000120675 278 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm23886-201ENSMUST00000122684 313 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm26280-201ENSMUST00000157096 101 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm17204-201ENSMUST00000167936 478 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm24816-201ENSMUST00000175311 151 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm28637-201ENSMUST00000179424 345 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm28399-201ENSMUST00000186221 318 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm28572-201ENSMUST00000187444 318 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm45445-201ENSMUST00000209586 232 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm24313-201ENSMUST00000082561 133 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Gm23058-201ENSMUST00000093703 107 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trub1Q8C0D0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm13676-201ENSMUST00000122185 591 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm23889-201ENSMUST00000122689 104 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm24075-201ENSMUST00000158175 72 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm24875-201ENSMUST00000158888 104 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm8580-201ENSMUST00000160295 464 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm16561-201ENSMUST00000163001 192 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Adgrg4-206ENSMUST00000168724 531 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm3104-201ENSMUST00000171004 473 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm25942-201ENSMUST00000180080 110 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm25412-201ENSMUST00000180258 107 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm28623-201ENSMUST00000187219 192 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm20811-201ENSMUST00000190500 553 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Mir3069-201ENSMUST00000198802 65 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm43368-201ENSMUST00000200638 409 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm45551-201ENSMUST00000211459 928 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trub1Q8C0D0 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm23472-201ENSMUST00000101806 191 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm23577-201ENSMUST00000103950 110 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm25728-201ENSMUST00000104525 159 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm25560-201ENSMUST00000104606 176 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm11898-201ENSMUST00000117161 385 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm26099-201ENSMUST00000157248 109 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm22947-201ENSMUST00000158559 91 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm23205-201ENSMUST00000158671 103 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm24497-201ENSMUST00000177868 191 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm25939-201ENSMUST00000179876 191 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm27220-201ENSMUST00000183453 262 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.36□□□□□ -2.03
Trub1Q8C0D0 Gm18340-201ENSMUST00000196342 609 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms