Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Trim35Q8C006 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim35Q8C006 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim35Q8C006 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim35Q8C006 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim35Q8C006 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm24989-201ENSMUST00000104461 88 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm24468-201ENSMUST00000104489 104 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm22676-201ENSMUST00000116972 129 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm11976-201ENSMUST00000119236 295 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm26088-201ENSMUST00000157896 131 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm25978-201ENSMUST00000158698 90 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm22548-201ENSMUST00000174899 78 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim35Q8C006 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm45429-201ENSMUST00000209527 172 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 AC122194.1-201ENSMUST00000220549 293 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 AC122327.1-201ENSMUST00000220778 108 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 AC121898.1-201ENSMUST00000227599 288 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm23238-201ENSMUST00000083007 164 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim35Q8C006 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.2□□□□□ -1.42
Trim35Q8C006 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim35Q8C006 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim35Q8C006 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim35Q8C006 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm24709-201ENSMUST00000104123 132 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm23011-201ENSMUST00000104148 132 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm26289-201ENSMUST00000104169 131 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm22710-201ENSMUST00000116892 125 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm13478-201ENSMUST00000118312 413 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm14294-201ENSMUST00000119749 751 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm24720-201ENSMUST00000157518 166 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm25572-201ENSMUST00000157527 172 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm25882-201ENSMUST00000157784 85 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm22311-201ENSMUST00000158006 110 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm25487-201ENSMUST00000158725 125 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm45070-201ENSMUST00000208100 246 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 AC133517.1-203ENSMUST00000225570 390 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm25147-201ENSMUST00000083030 105 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.19□□□□□ -1.42
Trim35Q8C006 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim35Q8C006 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Trim35Q8C006 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm11432-201ENSMUST00000117334 231 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm13641-201ENSMUST00000117993 473 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm15618-201ENSMUST00000121610 452 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm22790-201ENSMUST00000157229 129 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm24246-201ENSMUST00000157315 132 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm20530-201ENSMUST00000174261 254 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm29167-201ENSMUST00000190024 377 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms