Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm11221-201ENSMUST00000117230 597 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm12683-201ENSMUST00000117528 415 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm7429-201ENSMUST00000118664 348 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm14815-201ENSMUST00000120060 488 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm23206-201ENSMUST00000122720 184 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm23602-201ENSMUST00000157258 132 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm24244-201ENSMUST00000157317 130 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm23865-201ENSMUST00000157723 97 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm25706-201ENSMUST00000157828 247 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm25977-201ENSMUST00000158697 85 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm28660-201ENSMUST00000186496 253 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm29475-201ENSMUST00000190767 312 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm42672-201ENSMUST00000197821 352 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm43315-201ENSMUST00000198120 313 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm25853-201ENSMUST00000082793 132 ntBASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm23431-201ENSMUST00000104006 107 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm7421-201ENSMUST00000119298 639 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm11890-201ENSMUST00000119585 417 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm7365-201ENSMUST00000120877 639 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm23540-201ENSMUST00000157543 164 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm22597-201ENSMUST00000157602 80 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm24504-201ENSMUST00000157679 100 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm25384-201ENSMUST00000157807 105 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm28010-201ENSMUST00000179485 126 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm44322-201ENSMUST00000196830 115 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm43717-201ENSMUST00000198684 310 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm45245-201ENSMUST00000210082 376 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm46138-201ENSMUST00000215294 426 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm26206-201ENSMUST00000082908 110 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp40Q8BWR4 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm22834-201ENSMUST00000102021 79 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm12053-201ENSMUST00000119022 252 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm15026-201ENSMUST00000119219 458 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm24898-201ENSMUST00000158133 106 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm22381-201ENSMUST00000158186 107 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm24314-201ENSMUST00000158274 123 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm20693-201ENSMUST00000177431 211 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm26180-201ENSMUST00000179942 107 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm24306-201ENSMUST00000180229 79 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm36934-201ENSMUST00000192007 306 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm45590-201ENSMUST00000209715 262 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm8423-201ENSMUST00000211387 607 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm46389-201ENSMUST00000223199 392 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm8724-201ENSMUST00000081668 483 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm23925-201ENSMUST00000082471 132 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm24147-201ENSMUST00000082763 144 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 Gm44120-201ENSMUST00000203022 3023 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.23□□□□□ -1.57
Usp40Q8BWR4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm8475-201ENSMUST00000118211 526 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm13755-201ENSMUST00000118509 305 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm11219-201ENSMUST00000118565 358 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm13831-201ENSMUST00000118764 302 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm14861-201ENSMUST00000119451 455 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm12686-201ENSMUST00000120546 397 ntBASIC5.22□□□□□ -1.57
Usp40Q8BWR4 Gm13345-201ENSMUST00000121928 228 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms