Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm22657-201ENSMUST00000104197 132 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm13232-201ENSMUST00000121816 632 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm25920-201ENSMUST00000158307 99 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm17065-201ENSMUST00000165245 239 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm17072-201ENSMUST00000166673 658 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm25360-201ENSMUST00000178786 191 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm27540-201ENSMUST00000184950 187 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm11935-201ENSMUST00000118608 399 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15195-201ENSMUST00000118775 263 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm12156-201ENSMUST00000119188 554 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14861-201ENSMUST00000119451 455 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm12118-201ENSMUST00000119766 532 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm12564-201ENSMUST00000119860 321 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm6062-201ENSMUST00000120462 631 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm13396-201ENSMUST00000120617 271 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm13867-201ENSMUST00000120844 395 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm23171-201ENSMUST00000157159 264 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm24060-201ENSMUST00000157494 95 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Zakit-201ENSMUST00000157677 308 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm24676-201ENSMUST00000158758 75 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm16114-201ENSMUST00000161930 300 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm6051-201ENSMUST00000201529 352 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm45815-201ENSMUST00000220241 146 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.7□□□□□ -1.66
Sh3rf1Q69ZI1 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm13153-201ENSMUST00000120969 637 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm7840-201ENSMUST00000122086 533 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm23759-201ENSMUST00000158351 268 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm24636-201ENSMUST00000158673 288 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm17183-201ENSMUST00000171170 493 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Mir6336-201ENSMUST00000183581 130 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm27387-201ENSMUST00000184583 116 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm7837-201ENSMUST00000190873 412 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm30280-201ENSMUST00000192214 262 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm44977-201ENSMUST00000205283 420 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm45236-201ENSMUST00000208632 229 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm26454-201ENSMUST00000082682 107 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.69□□□□□ -1.66
Sh3rf1Q69ZI1 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms