Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm22590-201ENSMUST00000104247 128 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm23653-201ENSMUST00000116751 97 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm11898-201ENSMUST00000117161 385 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm9157-201ENSMUST00000117673 225 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm9059-201ENSMUST00000118319 183 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm11813-201ENSMUST00000118586 291 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm13557-201ENSMUST00000120771 382 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm22034-201ENSMUST00000157283 134 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm22216-201ENSMUST00000157557 114 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
Trim28Q62318 Gm9071-201ENSMUST00000165915 474 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm24757-201ENSMUST00000176987 371 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim28Q62318 Gm24897-201ENSMUST00000179033 107 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm37698-201ENSMUST00000192605 463 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim28Q62318 Mir7682-201ENSMUST00000198467 58 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Mir3970-201ENSMUST00000199287 90 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim28Q62318 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim28Q62318 Gm22423-201ENSMUST00000082861 184 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm23503-201ENSMUST00000083903 107 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim28Q62318 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim28Q62318 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim28Q62318 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim28Q62318 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim28Q62318 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim28Q62318 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim28Q62318 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.73□□□□□ -1.65
Trim28Q62318 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Trim28Q62318 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim28Q62318 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Gm12646-201ENSMUST00000119144 238 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm22208-201ENSMUST00000122658 110 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.72□□□□□ -1.65
Trim28Q62318 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm23168-201ENSMUST00000157156 143 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm23755-201ENSMUST00000157578 343 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm5263-201ENSMUST00000163646 601 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim28Q62318 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim28Q62318 Gm21978-201ENSMUST00000179696 377 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Mir6541-201ENSMUST00000183649 110 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm38088-201ENSMUST00000195829 241 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Gm35558-203ENSMUST00000222264 204 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.72□□□□□ -1.65
Trim28Q62318 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Trim28Q62318 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim28Q62318 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim28Q62318 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim28Q62318 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim28Q62318 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.71□□□□□ -1.65
Trim28Q62318 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Trim28Q62318 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim28Q62318 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm12722-201ENSMUST00000118507 493 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm11830-201ENSMUST00000120175 561 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.71□□□□□ -1.66
Trim28Q62318 Gm24875-201ENSMUST00000158888 104 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim28Q62318 Gm28299-201ENSMUST00000189908 339 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm28408-201ENSMUST00000191557 463 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm37575-201ENSMUST00000195467 309 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.71□□□□□ -1.66
Trim28Q62318 Gm42666-201ENSMUST00000201954 152 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.71□□□□□ -1.66
Trim28Q62318 Gm45588-201ENSMUST00000211213 630 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim28Q62318 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim28Q62318 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim28Q62318 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms