Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.22□□□□□ -2.05
Trav3-3Q5R1C3 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm15783-201ENSMUST00000117521 633 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm12427-201ENSMUST00000117719 302 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm13627-201ENSMUST00000119700 706 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm25572-201ENSMUST00000157527 172 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm26348-201ENSMUST00000157528 240 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm3104-201ENSMUST00000171004 473 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm20415-201ENSMUST00000172877 423 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm26928-201ENSMUST00000182674 572 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm29045-201ENSMUST00000187278 698 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm17966-201ENSMUST00000193453 594 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm2059-201ENSMUST00000212025 287 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm7753-201ENSMUST00000221007 867 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Snora23-201ENSMUST00000082517 184 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Snord104-201ENSMUST00000083192 70 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Gm22740-201ENSMUST00000083439 109 ntBASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav3-3Q5R1C3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm11285-201ENSMUST00000118443 322 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm14940-201ENSMUST00000119309 495 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm11430-201ENSMUST00000121317 217 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm22986-201ENSMUST00000122753 130 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm26100-201ENSMUST00000157245 127 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm24240-201ENSMUST00000157785 135 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm17164-201ENSMUST00000169013 506 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm23799-201ENSMUST00000175559 120 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Mir6371-201ENSMUST00000184470 111 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm29641-201ENSMUST00000188955 259 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm9696-202ENSMUST00000191541 830 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm29754-201ENSMUST00000206269 358 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm45245-201ENSMUST00000210082 376 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm18252-203ENSMUST00000215855 757 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Olfr815-201ENSMUST00000071557 951 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Gm24622-201ENSMUST00000082619 162 ntBASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav3-3Q5R1C3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm23530-201ENSMUST00000104564 137 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm12238-201ENSMUST00000127764 124 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm16354-201ENSMUST00000155376 150 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm25519-201ENSMUST00000158392 127 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm29602-201ENSMUST00000186887 442 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm37987-201ENSMUST00000194999 825 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm42958-201ENSMUST00000197595 318 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm45438-201ENSMUST00000210242 564 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm45696-201ENSMUST00000212088 985 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm19219-201ENSMUST00000215863 724 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm40598-201ENSMUST00000222953 547 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm4945-201ENSMUST00000075152 453 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Mir137-201ENSMUST00000083635 73 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm25007-201ENSMUST00000083808 133 ntBASIC2.19□□□□□ -2.06
Trav3-3Q5R1C3 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms