Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25107-201ENSMUST00000122472 129 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Mir6916-201ENSMUST00000184514 63 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm37979-201ENSMUST00000193065 712 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm38018-201ENSMUST00000195651 540 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm45879-201ENSMUST00000212521 392 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm5655-201ENSMUST00000221078 901 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm23628-201ENSMUST00000082464 173 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm15103-201ENSMUST00000119893 871 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm11252-201ENSMUST00000120572 939 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm22957-201ENSMUST00000122511 123 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm16533-201ENSMUST00000140035 228 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm22225-201ENSMUST00000157358 278 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Mir3112-201ENSMUST00000175431 82 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm27532-201ENSMUST00000183726 113 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm27698-201ENSMUST00000184060 249 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Trdv3-201ENSMUST00000198551 309 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm44520-201ENSMUST00000205447 802 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm18645-202ENSMUST00000212222 760 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm19540-201ENSMUST00000221843 810 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Gm25856-201ENSMUST00000082786 75 ntBASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Upf3bQ3ULL6 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm25407-201ENSMUST00000104102 134 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm26247-201ENSMUST00000116702 91 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm25270-201ENSMUST00000122606 138 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm22839-201ENSMUST00000158436 304 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Mir7013-201ENSMUST00000183540 72 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm43096-201ENSMUST00000196173 421 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm42593-201ENSMUST00000198469 377 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm43142-201ENSMUST00000198670 361 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm43264-201ENSMUST00000202284 325 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm44088-201ENSMUST00000204595 237 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm8209-201ENSMUST00000206386 553 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Gm23939-201ENSMUST00000082880 133 ntBASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Upf3bQ3ULL6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm29330-201ENSMUST00000190032 699 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm28098-201ENSMUST00000191361 699 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm42465-201ENSMUST00000197036 492 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm6590-201ENSMUST00000203343 687 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm44060-201ENSMUST00000204440 410 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm45192-201ENSMUST00000206749 283 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm45146-201ENSMUST00000207108 221 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm45023-201ENSMUST00000207951 379 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm9373-201ENSMUST00000208724 599 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm22507-201ENSMUST00000082773 160 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm24928-201ENSMUST00000083399 107 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Gm25897-201ENSMUST00000083709 107 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.73□□□□□ -1.97
Upf3bQ3ULL6 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms