Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm22755-201ENSMUST00000157143 100 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm26101-201ENSMUST00000157246 105 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm22225-201ENSMUST00000157358 278 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm24393-201ENSMUST00000158135 97 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm24739-201ENSMUST00000158855 292 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Mir5136-201ENSMUST00000175573 76 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm22290-201ENSMUST00000177655 107 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm22583-201ENSMUST00000178031 107 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm24713-201ENSMUST00000178850 107 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm28010-201ENSMUST00000179485 126 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm25448-201ENSMUST00000180065 107 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm27028-201ENSMUST00000182303 399 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm37617-201ENSMUST00000194309 159 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Mir5121-201ENSMUST00000198528 74 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm18429-201ENSMUST00000198707 421 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Brf2Q3UAW9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm13228-201ENSMUST00000118937 634 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm12238-201ENSMUST00000127764 124 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm23981-201ENSMUST00000157136 106 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm25438-201ENSMUST00000158281 110 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm22766-201ENSMUST00000158372 99 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm16101-201ENSMUST00000160695 430 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Mir5112-201ENSMUST00000174897 60 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm20698-201ENSMUST00000175657 233 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm23816-201ENSMUST00000179617 132 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Mir6899-201ENSMUST00000184798 64 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm8242-202ENSMUST00000193056 475 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm37523-201ENSMUST00000194901 412 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm42832-201ENSMUST00000196361 745 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm43804-201ENSMUST00000198280 456 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm45366-201ENSMUST00000209828 384 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm22508-201ENSMUST00000082772 110 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Snora70-201ENSMUST00000083047 137 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Brf2Q3UAW9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm22771-201ENSMUST00000104449 91 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm13717-201ENSMUST00000119868 365 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm14049-201ENSMUST00000121009 636 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm11384-201ENSMUST00000121376 303 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm16354-201ENSMUST00000155376 150 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm24784-201ENSMUST00000157640 62 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm26362-201ENSMUST00000158865 315 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm19898-201ENSMUST00000177490 251 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Mir6933-201ENSMUST00000184982 81 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms