Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm28717-201ENSMUST00000189950 315 ntBASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Gm18320-201ENSMUST00000211304 595 ntBASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Gm23099-201ENSMUST00000083454 139 ntBASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Usp39Q3TIX9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm24338-201ENSMUST00000104205 127 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm12255-201ENSMUST00000117184 284 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm14586-201ENSMUST00000119571 408 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm15106-201ENSMUST00000119691 821 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm11830-201ENSMUST00000120175 561 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm14049-201ENSMUST00000121009 636 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm22204-201ENSMUST00000122654 327 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm22211-201ENSMUST00000158097 156 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm24898-201ENSMUST00000158133 106 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm17148-201ENSMUST00000164702 249 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Mir6413-201ENSMUST00000184049 108 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Mir6363-201ENSMUST00000184880 114 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm38098-201ENSMUST00000194115 241 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm6012-201ENSMUST00000210821 730 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm18854-201ENSMUST00000211196 329 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm45710-201ENSMUST00000212847 215 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Snord21-201ENSMUST00000082519 94 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm23677-201ENSMUST00000083156 104 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm10222-201ENSMUST00000088336 294 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Usp39Q3TIX9 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.05□□□□□ -1.76
Usp39Q3TIX9 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm12871-201ENSMUST00000118758 438 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm13092-201ENSMUST00000136346 260 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm24745-201ENSMUST00000157840 85 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm25456-201ENSMUST00000157952 109 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm17109-201ENSMUST00000163985 358 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm17062-201ENSMUST00000166987 461 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm22290-201ENSMUST00000177655 107 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm22583-201ENSMUST00000178031 107 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm23660-201ENSMUST00000178362 79 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm24088-201ENSMUST00000179100 79 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm27699-201ENSMUST00000183553 180 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm28304-201ENSMUST00000185977 312 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm29256-201ENSMUST00000189094 312 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm28484-201ENSMUST00000190606 312 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm43975-201ENSMUST00000203023 481 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm43914-201ENSMUST00000203592 594 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm45150-201ENSMUST00000206051 467 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm10038-201ENSMUST00000077233 441 ntBASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms