Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm24622-201ENSMUST00000082619 162 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm22423-201ENSMUST00000082861 184 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm25141-201ENSMUST00000083177 107 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm23733-201ENSMUST00000083750 106 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm25833-201ENSMUST00000104137 133 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm13650-201ENSMUST00000117729 433 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm12118-201ENSMUST00000119766 532 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm11830-201ENSMUST00000120175 561 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm12693-201ENSMUST00000121965 483 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm6486-201ENSMUST00000166202 434 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm17538-201ENSMUST00000168236 327 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm10292-201ENSMUST00000183142 581 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm26988-201ENSMUST00000183296 945 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm28069-201ENSMUST00000189926 214 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm44959-201ENSMUST00000209127 231 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm45439-201ENSMUST00000211723 359 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm29818-201ENSMUST00000218070 165 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm23518-201ENSMUST00000082835 153 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm23677-201ENSMUST00000083156 104 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.67□□□□□ -1.82
Col28a1Q2UY11 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm25088-201ENSMUST00000101803 79 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm24982-201ENSMUST00000104456 132 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm11408-201ENSMUST00000117889 519 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm11566-201ENSMUST00000118550 203 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm11784-201ENSMUST00000118568 474 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm7219-201ENSMUST00000119619 297 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm14815-201ENSMUST00000120060 488 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm25572-201ENSMUST00000157527 172 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm22219-201ENSMUST00000157562 319 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm23585-201ENSMUST00000157656 102 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm23473-201ENSMUST00000158883 116 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm25243-201ENSMUST00000174912 207 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm26177-201ENSMUST00000178683 107 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm37416-201ENSMUST00000193596 318 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm37097-201ENSMUST00000193676 336 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm37743-201ENSMUST00000194645 376 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm17781-201ENSMUST00000195232 649 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm42453-201ENSMUST00000200477 409 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.66□□□□□ -1.82
Col28a1Q2UY11 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col28a1Q2UY11 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms