Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a1Q04857 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm23709-201ENSMUST00000104364 130 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm15526-201ENSMUST00000112504 204 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm14303-201ENSMUST00000121320 171 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm25965-201ENSMUST00000157170 93 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm24909-201ENSMUST00000157290 280 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm22219-201ENSMUST00000157562 319 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm22435-201ENSMUST00000158552 128 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm17183-201ENSMUST00000171170 493 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm7958-201ENSMUST00000178255 468 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm23816-201ENSMUST00000179617 132 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm7950-201ENSMUST00000179633 468 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm29350-201ENSMUST00000189141 541 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm37636-201ENSMUST00000193583 359 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm19177-201ENSMUST00000204520 613 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.96□□□□□ -1.62
Col6a1Q04857 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm33654-201ENSMUST00000221704 215 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm23302-201ENSMUST00000082710 100 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a1Q04857 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.96□□□□□ -1.62
Col6a1Q04857 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a1Q04857 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a1Q04857 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a1Q04857 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm15112-201ENSMUST00000120152 860 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm7327-201ENSMUST00000120925 652 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm24914-201ENSMUST00000157285 313 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm22601-201ENSMUST00000157595 250 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm8114-201ENSMUST00000172225 484 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm27773-201ENSMUST00000184087 78 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm38150-201ENSMUST00000192996 452 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm43814-201ENSMUST00000197851 413 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm43407-201ENSMUST00000199816 317 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm44016-201ENSMUST00000203463 164 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm7540-201ENSMUST00000219764 926 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.95□□□□□ -1.62
Col6a1Q04857 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm24316-201ENSMUST00000083041 107 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm24457-201ENSMUST00000083196 105 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.95□□□□□ -1.62
Col6a1Q04857 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a1Q04857 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.95□□□□□ -1.62
Col6a1Q04857 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a1Q04857 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Snora64-201ENSMUST00000104521 134 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm13550-201ENSMUST00000118185 525 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm14652-201ENSMUST00000118479 235 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm25817-201ENSMUST00000177758 121 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm24766-201ENSMUST00000179182 121 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm9022-202ENSMUST00000183285 483 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm8790-201ENSMUST00000194108 322 ntBASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a1Q04857 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a1Q04857 Gm46998-201ENSMUST00000221444 330 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms