Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nkx3-1P97436 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm27369-201ENSMUST00000185182 71 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm2719-201ENSMUST00000191929 444 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm37098-201ENSMUST00000192290 244 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm21089-201ENSMUST00000215843 325 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm18039-201ENSMUST00000217816 728 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Nkx3-1P97436 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm23447-201ENSMUST00000082798 163 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm15382-201ENSMUST00000118011 537 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm13751-201ENSMUST00000120280 752 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.17□□□□□ -2.06
Nkx3-1P97436 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm23599-201ENSMUST00000157261 251 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm22839-201ENSMUST00000158436 304 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm24773-201ENSMUST00000158513 99 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm5929-201ENSMUST00000166883 487 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm17063-201ENSMUST00000168135 456 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm24417-201ENSMUST00000178123 79 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm24653-201ENSMUST00000178541 79 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm25934-201ENSMUST00000178642 79 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Mir6353-201ENSMUST00000183596 113 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm27477-201ENSMUST00000184649 143 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm42474-201ENSMUST00000201073 505 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm44161-201ENSMUST00000203532 253 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm44585-201ENSMUST00000207150 607 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm44844-201ENSMUST00000207242 336 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm18043-201ENSMUST00000216741 739 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.17□□□□□ -2.06
Nkx3-1P97436 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm22752-201ENSMUST00000102083 109 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm23577-201ENSMUST00000103950 110 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm26341-201ENSMUST00000104561 134 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm16584-201ENSMUST00000159267 189 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nkx3-1P97436 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm6615-201ENSMUST00000199426 631 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm42828-201ENSMUST00000199669 469 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm43967-201ENSMUST00000203787 301 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm9762-201ENSMUST00000036976 444 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm22444-201ENSMUST00000093693 108 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nkx3-1P97436 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nkx3-1P97436 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.16□□□□□ -2.06
Nkx3-1P97436 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.15□□□□□ -2.06
Nkx3-1P97436 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.15□□□□□ -2.06
Nkx3-1P97436 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
Nkx3-1P97436 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.15□□□□□ -2.06
Nkx3-1P97436 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm25097-201ENSMUST00000104042 145 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm23551-201ENSMUST00000116852 121 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm14880-201ENSMUST00000117581 292 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm13756-201ENSMUST00000117618 222 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm15025-201ENSMUST00000118434 418 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm12495-201ENSMUST00000119750 447 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm22794-201ENSMUST00000157228 306 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm22563-201ENSMUST00000157333 269 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm24210-201ENSMUST00000158263 133 ntBASIC2.15□□□□□ -2.07
Nkx3-1P97436 Gm22693-201ENSMUST00000175049 442 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms