Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sox1P53783 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm45101-201ENSMUST00000208327 232 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm45772-201ENSMUST00000212961 240 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm45815-201ENSMUST00000220241 146 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox1P53783 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox1P53783 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox1P53783 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox1P53783 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.78□□□□□ -1.64
Sox1P53783 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Sox1P53783 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Sox1P53783 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sox1P53783 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sox1P53783 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox1P53783 Gm13967-201ENSMUST00000120404 380 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm13132-201ENSMUST00000121194 472 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.78□□□□□ -1.64
Sox1P53783 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.78□□□□□ -1.64
Sox1P53783 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 Gm26350-201ENSMUST00000157531 288 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm23098-201ENSMUST00000157552 299 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm17152-201ENSMUST00000172430 535 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm24862-201ENSMUST00000179103 79 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm23310-201ENSMUST00000179105 79 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm25461-201ENSMUST00000179293 79 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Mir6914-201ENSMUST00000184999 69 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 Gm44543-201ENSMUST00000209136 396 ntBASIC4.78□□□□□ -1.64
Sox1P53783 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.78□□□□□ -1.64
Sox1P53783 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm6065-201ENSMUST00000081336 492 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm22973-201ENSMUST00000083298 191 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sox1P53783 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sox1P53783 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox1P53783 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox1P53783 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox1P53783 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox1P53783 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.78□□□□□ -1.64
Sox1P53783 BC051076-202ENSMUST00000199477 2868 ntBASIC4.78□□□□□ -1.64
Sox1P53783 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sox1P53783 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sox1P53783 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox1P53783 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sox1P53783 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox1P53783 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sox1P53783 Gm24951-201ENSMUST00000102182 109 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm14086-201ENSMUST00000117152 173 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm11200-201ENSMUST00000121698 448 ntBASIC4.77□□□□□ -1.65
Sox1P53783 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sox1P53783 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sox1P53783 Gm24503-201ENSMUST00000158454 135 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm24085-201ENSMUST00000175172 116 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Mir7578-201ENSMUST00000183455 82 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Mir6993-201ENSMUST00000184912 65 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC4.77□□□□□ -1.65
Sox1P53783 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.77□□□□□ -1.65
Sox1P53783 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm44059-201ENSMUST00000204048 351 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm44446-201ENSMUST00000204864 255 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.77□□□□□ -1.65
Sox1P53783 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Gm8672-201ENSMUST00000221200 332 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.77□□□□□ -1.65
Sox1P53783 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm25202-201ENSMUST00000082838 191 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm22974-201ENSMUST00000083301 103 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.77□□□□□ -1.65
Sox1P53783 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sox1P53783 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sox1P53783 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sox1P53783 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Sox1P53783 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Sox1P53783 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Sox1P53783 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sox1P53783 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms