Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.69□□□□□ -1.82
Traf1P39428 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.69□□□□□ -1.82
Traf1P39428 Gm14363-201ENSMUST00000122304 409 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.69□□□□□ -1.82
Traf1P39428 Gm2855-201ENSMUST00000166765 456 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Gm27161-201ENSMUST00000183960 562 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Gm29330-201ENSMUST00000190032 699 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Gm28098-201ENSMUST00000191361 699 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.69□□□□□ -1.82
Traf1P39428 Gm45778-201ENSMUST00000211959 153 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Traf1P39428 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.69□□□□□ -1.82
Traf1P39428 LOC667541-201ENSMUST00000223408 278 ntBASIC3.69□□□□□ -1.82
Traf1P39428 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.69□□□□□ -1.82
Traf1P39428 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Gm22265-201ENSMUST00000082947 116 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Traf1P39428 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Traf1P39428 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Traf1P39428 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Traf1P39428 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Traf1P39428 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Traf1P39428 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Traf1P39428 Gm13761-201ENSMUST00000117238 807 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm11490-201ENSMUST00000118128 272 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm14101-201ENSMUST00000121502 473 ntBASIC3.68□□□□□ -1.82
Traf1P39428 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm26027-201ENSMUST00000122725 268 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm22026-201ENSMUST00000122735 281 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm22818-201ENSMUST00000157446 104 ntBASIC3.68□□□□□ -1.82
Traf1P39428 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm7675-201ENSMUST00000208828 686 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.68□□□□□ -1.82
Traf1P39428 Gm45860-201ENSMUST00000212700 334 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm4921-201ENSMUST00000219804 992 ntBASIC3.68□□□□□ -1.82
Traf1P39428 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.68□□□□□ -1.82
Traf1P39428 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.68□□□□□ -1.82
Traf1P39428 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm10088-201ENSMUST00000074116 423 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Traf1P39428 Gm24610-201ENSMUST00000083270 109 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm22740-201ENSMUST00000083439 109 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Traf1P39428 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Traf1P39428 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Traf1P39428 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Traf1P39428 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.68□□□□□ -1.82
Traf1P39428 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Traf1P39428 Gm24890-201ENSMUST00000104389 102 ntBASIC3.67□□□□□ -1.82
Traf1P39428 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Traf1P39428 Gm13614-201ENSMUST00000117306 503 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm12640-201ENSMUST00000120097 310 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm13443-201ENSMUST00000120770 555 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.67□□□□□ -1.82
Traf1P39428 Gm22794-201ENSMUST00000157228 306 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm25334-201ENSMUST00000158036 110 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.67□□□□□ -1.82
Traf1P39428 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Traf1P39428 Gm4479-201ENSMUST00000178807 171 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm38280-201ENSMUST00000192610 158 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm44208-201ENSMUST00000205199 421 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.67□□□□□ -1.82
Traf1P39428 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.67□□□□□ -1.82
Traf1P39428 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Gm23733-201ENSMUST00000083750 106 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Traf1P39428 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Traf1P39428 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.67□□□□□ -1.82
Traf1P39428 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm26377-201ENSMUST00000102184 108 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm22939-201ENSMUST00000103958 131 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm25168-201ENSMUST00000104189 132 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm9850-201ENSMUST00000117916 227 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm2318-201ENSMUST00000119623 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm13717-201ENSMUST00000119868 365 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm2768-201ENSMUST00000121062 250 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm11414-201ENSMUST00000121795 263 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm24627-201ENSMUST00000122764 138 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm22817-201ENSMUST00000157448 356 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm24720-201ENSMUST00000157518 166 ntBASIC3.66□□□□□ -1.82
Traf1P39428 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm20450-201ENSMUST00000173652 147 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm7438-201ENSMUST00000177664 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm7408-201ENSMUST00000178014 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm7386-201ENSMUST00000178020 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm3657-201ENSMUST00000178170 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm7415-201ENSMUST00000178205 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm7398-201ENSMUST00000178589 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm7391-201ENSMUST00000178680 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm7375-201ENSMUST00000179232 639 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms