Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23446-201ENSMUST00000177977 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26201-201ENSMUST00000178047 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm24711-201ENSMUST00000178062 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm24609-201ENSMUST00000178166 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm23265-201ENSMUST00000178321 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm22812-201ENSMUST00000178329 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26246-201ENSMUST00000178388 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm25155-201ENSMUST00000178450 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm24760-201ENSMUST00000178530 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm22285-201ENSMUST00000178576 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm22417-201ENSMUST00000178656 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26270-201ENSMUST00000178690 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm23313-201ENSMUST00000178931 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm23089-201ENSMUST00000178947 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Sdc1P18828 Gm24153-201ENSMUST00000179280 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm25597-201ENSMUST00000179388 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm25816-201ENSMUST00000179764 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26188-201ENSMUST00000179963 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26433-201ENSMUST00000180227 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm22128-201ENSMUST00000180346 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm27834-201ENSMUST00000183427 125 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Mir6986-201ENSMUST00000184483 58 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Mir3620-201ENSMUST00000184710 61 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm27608-201ENSMUST00000184822 162 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.4□□□□□ -2.03
Sdc1P18828 Gm28779-201ENSMUST00000189678 323 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm9696-202ENSMUST00000191541 830 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc1P18828 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.4□□□□□ -2.03
Sdc1P18828 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc1P18828 Gm21007-201ENSMUST00000221024 326 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Sdc1P18828 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Sdc1P18828 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc1P18828 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Sdc1P18828 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm23273-201ENSMUST00000104058 135 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm26418-201ENSMUST00000104275 137 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm24855-201ENSMUST00000104848 97 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm6664-201ENSMUST00000119138 468 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm14867-201ENSMUST00000120156 866 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm12723-201ENSMUST00000120700 451 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm14651-201ENSMUST00000147192 442 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm24240-201ENSMUST00000157785 135 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm10357-201ENSMUST00000159886 264 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sdc1P18828 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm26141-201ENSMUST00000175299 126 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Mir5123-201ENSMUST00000177794 83 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Mir6386-201ENSMUST00000183558 104 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm27392-201ENSMUST00000185041 101 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm28647-201ENSMUST00000188416 197 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm19891-201ENSMUST00000189771 303 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm38231-201ENSMUST00000192030 347 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm44355-201ENSMUST00000200417 104 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm19649-201ENSMUST00000201126 822 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm45796-201ENSMUST00000212483 114 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm4036-201ENSMUST00000220842 626 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sdc1P18828 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Gm26165-201ENSMUST00000083791 138 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc1P18828 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Sdc1P18828 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.39□□□□□ -2.03
Sdc1P18828 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc1P18828 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms