Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.53□□□□□ -2
Cdx1P18111 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdx1P18111 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm22936-201ENSMUST00000103955 126 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm14811-201ENSMUST00000117070 117 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm2288-201ENSMUST00000118560 638 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm7429-201ENSMUST00000118664 348 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm11913-201ENSMUST00000119094 336 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm13751-201ENSMUST00000120280 752 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm14600-201ENSMUST00000121032 630 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm16111-201ENSMUST00000162128 285 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdx1P18111 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm38075-201ENSMUST00000191979 920 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm37989-201ENSMUST00000195202 803 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.52□□□□□ -2.01
Cdx1P18111 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cdx1P18111 Gm4987-201ENSMUST00000078326 408 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm23136-201ENSMUST00000083425 99 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Gm23096-201ENSMUST00000083447 107 ntBASIC2.52□□□□□ -2.01
Cdx1P18111 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cdx1P18111 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cdx1P18111 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cdx1P18111 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx1P18111 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdx1P18111 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cdx1P18111 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Cdx1P18111 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdx1P18111 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm13454-201ENSMUST00000118166 483 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm13239-201ENSMUST00000119920 637 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm14915-201ENSMUST00000120747 204 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm14651-201ENSMUST00000147192 442 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm23588-201ENSMUST00000157659 99 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdx1P18111 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm7329-201ENSMUST00000185915 210 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm37866-201ENSMUST00000191950 696 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.51□□□□□ -2.01
Cdx1P18111 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm19147-201ENSMUST00000199622 652 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm43478-201ENSMUST00000200381 292 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm19987-201ENSMUST00000216339 499 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm18043-201ENSMUST00000216741 739 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm31849-201ENSMUST00000220306 375 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm10038-201ENSMUST00000077233 441 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm26128-201ENSMUST00000083170 110 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Gm23249-201ENSMUST00000083369 161 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Cdx1P18111 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.51□□□□□ -2.01
Cdx1P18111 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cdx1P18111 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cdx1P18111 Gm22023-201ENSMUST00000104354 130 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cdx1P18111 Gm2348-201ENSMUST00000108782 300 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm14843-201ENSMUST00000119596 212 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm24627-201ENSMUST00000122764 138 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.5□□□□□ -2.01
Cdx1P18111 Gm26100-201ENSMUST00000157245 127 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm23773-201ENSMUST00000158985 296 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.5□□□□□ -2.01
Cdx1P18111 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cdx1P18111 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cdx1P18111 Gm24086-201ENSMUST00000175171 98 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm27374-201ENSMUST00000183660 81 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cdx1P18111 Gm43393-201ENSMUST00000200147 194 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.5□□□□□ -2.01
Cdx1P18111 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cdx1P18111 Gm18597-201ENSMUST00000209519 694 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.5□□□□□ -2.01
Cdx1P18111 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cdx1P18111 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Cdx1P18111 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Cdx1P18111 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cdx1P18111 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.49□□□□□ -2.01
Cdx1P18111 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.49□□□□□ -2.01
Cdx1P18111 Gm14681-201ENSMUST00000118047 411 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms