Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Supt4b-201ENSMUST00000214434 351 ntBASIC5.08□□□□□ -1.6
Msx1P13297 AC157476.1-201ENSMUST00000215555 169 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Mir133a-1-201ENSMUST00000083465 68 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm10351-201ENSMUST00000087694 125 ntBASIC5.08□□□□□ -1.6
Msx1P13297 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Msx1P13297 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Msx1P13297 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Msx1P13297 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Msx1P13297 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Msx1P13297 Gm37006-201ENSMUST00000195253 2674 ntBASIC5.08□□□□□ -1.6
Msx1P13297 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Msx1P13297 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Msx1P13297 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Msx1P13297 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Msx1P13297 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msx1P13297 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Gm22936-201ENSMUST00000103955 126 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Gm23319-201ENSMUST00000104467 131 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Gm9003-201ENSMUST00000121810 482 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC5.07□□□□□ -1.6
Msx1P13297 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.07□□□□□ -1.6
Msx1P13297 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Msx1P13297 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Gm22654-201ENSMUST00000157874 105 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Gm27535-201ENSMUST00000183814 157 ntBASIC5.07□□□□□ -1.6
Msx1P13297 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Msx1P13297 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Gm37693-201ENSMUST00000194562 234 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.07□□□□□ -1.6
Msx1P13297 Gm17811-201ENSMUST00000206193 387 ntBASIC5.07□□□□□ -1.6
Msx1P13297 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC5.07□□□□□ -1.6
Msx1P13297 CT030247.1-201ENSMUST00000216810 267 ntBASIC5.07□□□□□ -1.6
Msx1P13297 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.07□□□□□ -1.6
Msx1P13297 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Snord15b-201ENSMUST00000083032 145 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Msx1P13297 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Msx1P13297 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.07□□□□□ -1.6
Msx1P13297 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Msx1P13297 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Msx1P13297 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.06□□□□□ -1.6
Msx1P13297 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Msx1P13297 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Msx1P13297 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Msx1P13297 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm22217-201ENSMUST00000157556 313 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Mir1967-201ENSMUST00000157789 82 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm22606-201ENSMUST00000158290 103 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm17166-201ENSMUST00000172006 431 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm25935-201ENSMUST00000178746 107 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm27754-201ENSMUST00000183340 126 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm28627-201ENSMUST00000186141 453 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm18956-201ENSMUST00000192857 480 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm43309-201ENSMUST00000200837 458 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm43028-201ENSMUST00000202561 481 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm43978-201ENSMUST00000203491 451 ntBASIC5.06□□□□□ -1.6
Msx1P13297 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Gm25698-201ENSMUST00000082897 107 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Msx1P13297 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.06□□□□□ -1.6
Msx1P13297 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Gm14914-201ENSMUST00000117576 2031 ntBASIC5.06□□□□□ -1.6
Msx1P13297 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Msx1P13297 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Msx1P13297 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Gm21035-201ENSMUST00000207867 2608 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Msx1P13297 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx1P13297 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msx1P13297 Gm25421-201ENSMUST00000104218 164 ntBASIC5.05□□□□□ -1.6
Msx1P13297 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Gm23178-201ENSMUST00000116782 95 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm13321-201ENSMUST00000117101 400 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm14874-201ENSMUST00000118995 438 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm23902-201ENSMUST00000157571 134 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm22531-201ENSMUST00000158819 140 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm22411-201ENSMUST00000175462 126 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm22002-201ENSMUST00000175622 125 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms