Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25534-201ENSMUST00000175365 125 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm24862-201ENSMUST00000179103 79 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm23310-201ENSMUST00000179105 79 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm25461-201ENSMUST00000179293 79 ntBASIC4.98□□□□□ -1.61
RaraP11416 Mir6975-201ENSMUST00000184879 61 ntBASIC4.98□□□□□ -1.61
RaraP11416 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Gm18325-201ENSMUST00000203228 835 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm44446-201ENSMUST00000204864 255 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm45859-201ENSMUST00000212794 214 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.98□□□□□ -1.61
RaraP11416 Gm46190-201ENSMUST00000219650 427 ntBASIC4.98□□□□□ -1.61
RaraP11416 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.98□□□□□ -1.61
RaraP11416 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.98□□□□□ -1.61
RaraP11416 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.98□□□□□ -1.61
RaraP11416 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RaraP11416 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RaraP11416 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RaraP11416 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.98□□□□□ -1.61
RaraP11416 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
RaraP11416 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RaraP11416 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.97□□□□□ -1.61
RaraP11416 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.97□□□□□ -1.61
RaraP11416 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
RaraP11416 Gm23709-201ENSMUST00000104364 130 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm14940-201ENSMUST00000119309 495 ntBASIC4.97□□□□□ -1.61
RaraP11416 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.97□□□□□ -1.61
RaraP11416 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.97□□□□□ -1.61
RaraP11416 Gm27723-201ENSMUST00000157398 63 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm22389-201ENSMUST00000158193 301 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm25923-201ENSMUST00000158312 138 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm24976-201ENSMUST00000158972 135 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm20526-201ENSMUST00000173416 158 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm27928-201ENSMUST00000183747 256 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm28534-201ENSMUST00000187744 676 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm32340-201ENSMUST00000192883 259 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm44938-201ENSMUST00000208614 427 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm45403-201ENSMUST00000209453 276 ntBASIC4.97□□□□□ -1.61
RaraP11416 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.97□□□□□ -1.61
RaraP11416 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.97□□□□□ -1.61
RaraP11416 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RaraP11416 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.97□□□□□ -1.61
RaraP11416 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.97□□□□□ -1.61
RaraP11416 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.97□□□□□ -1.61
RaraP11416 Gm23731-201ENSMUST00000083749 107 ntBASIC4.97□□□□□ -1.61
RaraP11416 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RaraP11416 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.97□□□□□ -1.61
RaraP11416 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.97□□□□□ -1.61
RaraP11416 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RaraP11416 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.97□□□□□ -1.61
RaraP11416 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
RaraP11416 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
RaraP11416 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
RaraP11416 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RaraP11416 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
RaraP11416 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.96□□□□□ -1.62
RaraP11416 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RaraP11416 Gm25096-201ENSMUST00000104043 129 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.96□□□□□ -1.62
RaraP11416 Gm14657-201ENSMUST00000117461 302 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm14512-201ENSMUST00000117924 230 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm11600-201ENSMUST00000119592 240 ntBASIC4.96□□□□□ -1.62
RaraP11416 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.96□□□□□ -1.62
RaraP11416 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RaraP11416 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.96□□□□□ -1.62
RaraP11416 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.96□□□□□ -1.62
RaraP11416 Gm26098-201ENSMUST00000157247 288 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm24774-201ENSMUST00000157384 134 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm25655-201ENSMUST00000158465 290 ntBASIC4.96□□□□□ -1.62
RaraP11416 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RaraP11416 Gm24085-201ENSMUST00000175172 116 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.96□□□□□ -1.62
RaraP11416 Mir6943-201ENSMUST00000185186 66 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm28921-201ENSMUST00000190219 378 ntBASIC4.96□□□□□ -1.62
RaraP11416 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.96□□□□□ -1.62
RaraP11416 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm5265-201ENSMUST00000076828 342 ntBASIC4.96□□□□□ -1.62
RaraP11416 Snord14e-201ENSMUST00000082857 90 ntBASIC4.96□□□□□ -1.62
RaraP11416 Gm24031-201ENSMUST00000083930 131 ntBASIC4.96□□□□□ -1.62
RaraP11416 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.96□□□□□ -1.62
RaraP11416 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RaraP11416 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RaraP11416 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RaraP11416 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RaraP11416 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RaraP11416 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RaraP11416 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.95□□□□□ -1.62
RaraP11416 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.95□□□□□ -1.62
RaraP11416 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RaraP11416 Mir881-201ENSMUST00000104844 78 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms