Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm44059-201ENSMUST00000204048 351 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.3□□□□□ -2.04
Col1a1P11087 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.3□□□□□ -2.04
Col1a1P11087 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col1a1P11087 Gm22683-201ENSMUST00000082854 137 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Gm23460-201ENSMUST00000083258 109 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col1a1P11087 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Col1a1P11087 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col1a1P11087 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col1a1P11087 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col1a1P11087 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Col1a1P11087 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col1a1P11087 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col1a1P11087 Gm24666-201ENSMUST00000158937 167 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Gm7094-201ENSMUST00000178379 366 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col1a1P11087 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col1a1P11087 Mir8119-201ENSMUST00000183371 129 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Mir7232-201ENSMUST00000197929 74 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col1a1P11087 Gm7039-201ENSMUST00000205138 346 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.29□□□□□ -2.04
Col1a1P11087 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col1a1P11087 Gm12495-201ENSMUST00000119750 447 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.28□□□□□ -2.04
Col1a1P11087 Gm25488-201ENSMUST00000158728 118 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Gm22254-201ENSMUST00000179186 110 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Gm28623-201ENSMUST00000187219 192 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Col1a1P11087 Gm28745-201ENSMUST00000190069 305 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Gm43239-201ENSMUST00000200131 201 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col1a1P11087 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col1a1P11087 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Col1a1P11087 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.28□□□□□ -2.04
Col1a1P11087 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Col1a1P11087 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col1a1P11087 Gm14229-201ENSMUST00000121178 850 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 Gm23716-201ENSMUST00000157348 144 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 Mir7021-201ENSMUST00000197026 63 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 Gm45063-201ENSMUST00000203726 472 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.27□□□□□ -2.05
Col1a1P11087 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.27□□□□□ -2.05
Col1a1P11087 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Col1a1P11087 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col1a1P11087 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.27□□□□□ -2.05
Col1a1P11087 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col1a1P11087 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Col1a1P11087 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col1a1P11087 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col1a1P11087 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col1a1P11087 Gm11893-201ENSMUST00000117829 491 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm20648-201ENSMUST00000175815 328 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm29167-201ENSMUST00000190024 377 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm28872-201ENSMUST00000191518 158 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.26□□□□□ -2.05
Col1a1P11087 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.26□□□□□ -2.05
Col1a1P11087 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.26□□□□□ -2.05
Col1a1P11087 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col1a1P11087 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col1a1P11087 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
Col1a1P11087 BC022960-201ENSMUST00000119987 1815 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col1a1P11087 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col1a1P11087 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col1a1P11087 Gm14588-201ENSMUST00000119895 172 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm12721-201ENSMUST00000120621 268 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm25979-201ENSMUST00000157177 138 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm25669-201ENSMUST00000157699 112 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm7182-201ENSMUST00000193351 732 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm37616-201ENSMUST00000193974 322 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Gm9375-201ENSMUST00000208899 903 ntBASIC2.26□□□□□ -2.05
Col1a1P11087 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col1a1P11087 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col1a1P11087 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.25□□□□□ -2.05
Col1a1P11087 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col1a1P11087 Gm11890-201ENSMUST00000119585 417 ntBASIC2.25□□□□□ -2.05
Col1a1P11087 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC2.25□□□□□ -2.05
Col1a1P11087 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.25□□□□□ -2.05
Col1a1P11087 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC2.25□□□□□ -2.05
Col1a1P11087 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col1a1P11087 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col1a1P11087 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col1a1P11087 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col1a1P11087 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col1a1P11087 Gm22316-201ENSMUST00000158012 216 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms