Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hoxd3P09027 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.21□□□□□ -1.74
Hoxd3P09027 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hoxd3P09027 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxd3P09027 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm22273-201ENSMUST00000104040 132 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm15803-201ENSMUST00000120118 394 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm14782-201ENSMUST00000120151 195 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm13488-201ENSMUST00000120419 179 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm11825-201ENSMUST00000120710 736 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm12617-201ENSMUST00000121268 381 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Mir1963-201ENSMUST00000158594 59 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm23806-201ENSMUST00000175157 109 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm22699-201ENSMUST00000175376 105 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm28344-201ENSMUST00000185704 279 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm43724-201ENSMUST00000197516 226 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.2□□□□□ -1.74
Hoxd3P09027 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm23722-201ENSMUST00000083002 130 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm23511-201ENSMUST00000083084 164 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm22294-201ENSMUST00000083308 104 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Mir449a-201ENSMUST00000083641 91 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm24762-201ENSMUST00000083689 104 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm26314-201ENSMUST00000083891 107 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxd3P09027 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.2□□□□□ -1.74
Hoxd3P09027 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxd3P09027 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Mir466b-3-201ENSMUST00000103806 81 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm11971-201ENSMUST00000117715 288 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm12902-201ENSMUST00000118389 322 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm22217-201ENSMUST00000157556 313 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm7335-201ENSMUST00000172475 373 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm5139-201ENSMUST00000175943 249 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm27541-201ENSMUST00000184078 122 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm10048-201ENSMUST00000194196 372 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Mir721-201ENSMUST00000200230 88 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Hoxd3P09027 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms