Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm13862-201ENSMUST00000121220 197 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm14623-201ENSMUST00000121398 603 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm11965-201ENSMUST00000122017 277 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.2□□□□□ -2.06
Col5a1O88207 Gm25883-201ENSMUST00000157781 271 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm24773-201ENSMUST00000158513 99 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm29516-201ENSMUST00000190402 468 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.2□□□□□ -2.06
Col5a1O88207 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm35570-201ENSMUST00000198730 681 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Col5a1O88207 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.2□□□□□ -2.06
Col5a1O88207 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.2□□□□□ -2.06
Col5a1O88207 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col5a1O88207 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col5a1O88207 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col5a1O88207 Olfr203-201ENSMUST00000089305 924 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col5a1O88207 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col5a1O88207 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm14823-201ENSMUST00000117698 238 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm15844-201ENSMUST00000118016 576 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm29640-201ENSMUST00000187972 278 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm37599-201ENSMUST00000193067 489 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.19□□□□□ -2.06
Col5a1O88207 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col5a1O88207 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm25414-201ENSMUST00000101814 107 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm25068-201ENSMUST00000103895 110 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm14589-201ENSMUST00000121640 727 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm22416-201ENSMUST00000158590 88 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm25119-201ENSMUST00000158815 88 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm6486-201ENSMUST00000166202 434 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm28917-201ENSMUST00000187294 237 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm28766-201ENSMUST00000191086 234 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm44830-201ENSMUST00000207667 584 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 CT030030.1-201ENSMUST00000218809 152 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Gm18704-201ENSMUST00000219736 446 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 AC162376.1-201ENSMUST00000220120 435 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.19□□□□□ -2.06
Col5a1O88207 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col5a1O88207 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col5a1O88207 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Mir592-201ENSMUST00000102113 96 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm25094-201ENSMUST00000103992 131 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm26077-201ENSMUST00000104064 123 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm14793-201ENSMUST00000118739 311 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm12213-201ENSMUST00000119924 353 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col5a1O88207 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.18□□□□□ -2.06
Col5a1O88207 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.18□□□□□ -2.06
Col5a1O88207 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Gm38231-201ENSMUST00000192030 347 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm43587-201ENSMUST00000199590 204 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm31520-201ENSMUST00000203048 733 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm31532-201ENSMUST00000203555 767 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm44559-201ENSMUST00000207177 1012 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm45654-201ENSMUST00000210980 123 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col5a1O88207 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Col5a1O88207 Gm23623-201ENSMUST00000082461 107 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Gm22444-201ENSMUST00000093693 108 ntBASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col5a1O88207 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms