Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm26280-201ENSMUST00000157096 101 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm25910-201ENSMUST00000157620 140 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.27□□□□□ -2.05
Sdc4O35988 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Sdc4O35988 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm19193-201ENSMUST00000190263 590 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm43124-201ENSMUST00000201878 278 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Sdc4O35988 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Sdc4O35988 Gm24313-201ENSMUST00000082561 133 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Sdc4O35988 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc4O35988 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm14736-201ENSMUST00000121470 336 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm22947-201ENSMUST00000158559 91 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm22264-201ENSMUST00000178200 107 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm6113-201ENSMUST00000180319 639 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm27477-201ENSMUST00000184649 143 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm37418-201ENSMUST00000195031 274 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm42438-201ENSMUST00000197832 974 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.26□□□□□ -2.05
Sdc4O35988 Gm44555-201ENSMUST00000209008 148 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.26□□□□□ -2.05
Sdc4O35988 Olfr815-201ENSMUST00000071557 951 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm24661-201ENSMUST00000083205 104 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.26□□□□□ -2.05
Sdc4O35988 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
Sdc4O35988 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Sdc4O35988 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Gm26077-201ENSMUST00000104064 123 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Sdc4O35988 Gm24010-201ENSMUST00000157731 282 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Mir5136-201ENSMUST00000175573 76 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Sdc4O35988 Gm7909-201ENSMUST00000182688 614 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Gm37377-201ENSMUST00000191733 304 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.25□□□□□ -2.05
Sdc4O35988 Gm22971-201ENSMUST00000083305 97 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Mir423-201ENSMUST00000083584 109 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.25□□□□□ -2.05
Sdc4O35988 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Sdc4O35988 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Sdc4O35988 Gm22658-201ENSMUST00000104196 155 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm13627-201ENSMUST00000119700 706 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm13433-201ENSMUST00000121701 240 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm23886-201ENSMUST00000122684 313 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm25979-201ENSMUST00000157177 138 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm24546-201ENSMUST00000158652 102 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm19641-201ENSMUST00000188432 417 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Mir3069-201ENSMUST00000198802 65 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.24□□□□□ -2.05
Sdc4O35988 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.24□□□□□ -2.05
Sdc4O35988 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Sdc4O35988 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Sdc4O35988 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.24□□□□□ -2.05
Sdc4O35988 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm22750-201ENSMUST00000102076 103 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm2288-201ENSMUST00000118560 638 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm13913-201ENSMUST00000121126 260 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm23116-201ENSMUST00000158481 67 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm22093-201ENSMUST00000158980 111 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.23□□□□□ -2.05
Sdc4O35988 Gm16326-201ENSMUST00000162843 414 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm21489-201ENSMUST00000189668 818 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm43070-201ENSMUST00000196938 415 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.23□□□□□ -2.05
Sdc4O35988 Gm43083-201ENSMUST00000199594 476 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm43295-201ENSMUST00000201439 412 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Gm43600-201ENSMUST00000202134 223 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc4O35988 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc4O35988 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Sdc4O35988 Gm24611-201ENSMUST00000083272 107 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Mir222-201ENSMUST00000083537 79 ntBASIC2.23□□□□□ -2.05
Sdc4O35988 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc4O35988 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Sdc4O35988 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm13273-201ENSMUST00000119737 159 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Gm14716-201ENSMUST00000120138 718 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Gm13555-201ENSMUST00000121668 319 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm24237-201ENSMUST00000157790 132 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms