Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14559-201ENSMUST00000121745 496 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Gm25979-201ENSMUST00000157177 138 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Gm11248-201ENSMUST00000119568 201 ntBASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Gm25247-201ENSMUST00000175475 90 ntBASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Gm37692-201ENSMUST00000192633 232 ntBASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Gm22378-201ENSMUST00000157481 111 ntBASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Gm45048-201ENSMUST00000207058 429 ntBASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.91□□□□□ -2.1
Col6a3E9PWQ3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Col6a3E9PWQ3 Gm5646-201ENSMUST00000120568 714 ntBASIC1.9□□□□□ -2.1
Col6a3E9PWQ3 Gm18557-201ENSMUST00000218710 433 ntBASIC1.9□□□□□ -2.1
Col6a3E9PWQ3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Col6a3E9PWQ3 Gm37320-201ENSMUST00000192781 4953 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm15854-201ENSMUST00000118879 808 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Mir3069-201ENSMUST00000198802 65 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm22978-201ENSMUST00000082607 160 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm26176-201ENSMUST00000083795 105 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm7195-201ENSMUST00000190869 1707 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm5937-201ENSMUST00000119715 643 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm22554-201ENSMUST00000157798 147 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm24467-201ENSMUST00000157887 126 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm18546-201ENSMUST00000197245 676 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm42526-201ENSMUST00000198956 393 ntBASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a3E9PWQ3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Gm27468-201ENSMUST00000183577 106 ntBASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Mir6353-201ENSMUST00000183596 113 ntBASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Gm42818-201ENSMUST00000198869 987 ntBASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.89□□□□□ -2.11
Col6a3E9PWQ3 Gm13082-201ENSMUST00000118877 561 ntBASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Gm23008-201ENSMUST00000158946 80 ntBASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Gm27796-201ENSMUST00000183863 261 ntBASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Gm14652-201ENSMUST00000118479 235 ntBASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Gm6429-201ENSMUST00000117144 475 ntBASIC1.88□□□□□ -2.11
Col6a3E9PWQ3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Mir343-201ENSMUST00000102360 75 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm25497-201ENSMUST00000104425 132 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm12509-201ENSMUST00000118033 609 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm15195-201ENSMUST00000118775 263 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm22727-201ENSMUST00000158090 116 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm43669-201ENSMUST00000198229 436 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm14877-201ENSMUST00000119803 478 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm25025-201ENSMUST00000175018 111 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm5358-201ENSMUST00000212814 353 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 AC105407.3-201ENSMUST00000224161 648 ntBASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col6a3E9PWQ3 Gm23424-201ENSMUST00000103889 110 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm25728-201ENSMUST00000104525 159 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm12765-201ENSMUST00000117273 615 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm13771-201ENSMUST00000117988 238 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm26277-201ENSMUST00000157097 152 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm27520-201ENSMUST00000184872 81 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm45072-201ENSMUST00000208673 929 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm43379-201ENSMUST00000196253 7726 ntBASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col6a3E9PWQ3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms