Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.45□□□□□ -2.02
Chd3B1AR17 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.45□□□□□ -2.02
Chd3B1AR17 Mir7225-201ENSMUST00000184178 54 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm19641-201ENSMUST00000188432 417 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm43765-201ENSMUST00000196303 893 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm45078-201ENSMUST00000205343 546 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm45150-201ENSMUST00000206051 467 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm45678-201ENSMUST00000210509 295 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Chd3B1AR17 Mir127-201ENSMUST00000093568 70 ntBASIC2.45□□□□□ -2.02
Chd3B1AR17 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Chd3B1AR17 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm25421-201ENSMUST00000104218 164 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm16561-201ENSMUST00000163001 192 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Mir6997-201ENSMUST00000184313 71 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm6801-201ENSMUST00000190697 339 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm43427-201ENSMUST00000198188 331 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm18855-201ENSMUST00000206689 570 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm18557-201ENSMUST00000218710 433 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm7214-201ENSMUST00000222428 272 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Chd3B1AR17 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.44□□□□□ -2.02
Chd3B1AR17 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
Chd3B1AR17 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
Chd3B1AR17 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm24889-201ENSMUST00000104388 132 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm15108-201ENSMUST00000116160 803 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm13756-201ENSMUST00000117618 222 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm14841-201ENSMUST00000121067 758 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm15111-201ENSMUST00000122142 878 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm15116-201ENSMUST00000122248 663 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.43□□□□□ -2.02
Chd3B1AR17 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Chd3B1AR17 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm44060-201ENSMUST00000204440 410 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.43□□□□□ -2.02
Chd3B1AR17 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Snord14c-201ENSMUST00000101927 86 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm11344-201ENSMUST00000122011 335 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm24475-201ENSMUST00000157435 143 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Mir3087-201ENSMUST00000199405 56 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.43□□□□□ -2.02
Chd3B1AR17 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.43□□□□□ -2.02
Chd3B1AR17 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.43□□□□□ -2.02
Chd3B1AR17 AC158142.3-201ENSMUST00000226230 675 ntBASIC2.43□□□□□ -2.02
Chd3B1AR17 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
Chd3B1AR17 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm17183-201ENSMUST00000171170 493 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm6113-201ENSMUST00000180319 639 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm28191-201ENSMUST00000189112 211 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm45687-201ENSMUST00000209454 155 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm18704-201ENSMUST00000219736 446 ntBASIC2.42□□□□□ -2.02
Chd3B1AR17 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Chd3B1AR17 Gm24715-201ENSMUST00000102377 95 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm12513-201ENSMUST00000118617 352 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm12042-201ENSMUST00000120479 301 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm22563-201ENSMUST00000157333 269 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm25488-201ENSMUST00000158728 118 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm29815-201ENSMUST00000202418 178 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm6012-201ENSMUST00000210821 730 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm4263-202ENSMUST00000221392 667 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm24210-201ENSMUST00000158263 133 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm27470-201ENSMUST00000184070 210 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm44348-201ENSMUST00000200165 122 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.41□□□□□ -2.02
Chd3B1AR17 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.41□□□□□ -2.02
Chd3B1AR17 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Chd3B1AR17 Gm14794-201ENSMUST00000118181 192 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm14793-201ENSMUST00000118739 311 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm16363-201ENSMUST00000132460 877 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm16533-201ENSMUST00000140035 228 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms