Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.21■□□□□ 0.35
Mrpl40Q9Z2Q5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Mrpl40Q9Z2Q5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Mrpl40Q9Z2Q5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Mrpl40Q9Z2Q5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm21814-202ENSMUST00000203277 873 ntBASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Timm23-208ENSMUST00000226683 750 ntBASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl40Q9Z2Q5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl40Q9Z2Q5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl40Q9Z2Q5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm10231-201ENSMUST00000181584 441 ntBASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms