Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.56■□□□□ 0.4
Mbd1Q9Z2E2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Mir7071-201ENSMUST00000184847 69 ntBASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Gm4974-201ENSMUST00000209974 875 ntBASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Mbd1Q9Z2E2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.54■□□□□ 0.4
Mbd1Q9Z2E2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mbd1Q9Z2E2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Gm10517-202ENSMUST00000192970 758 ntBASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mbd1Q9Z2E2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd1Q9Z2E2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd1Q9Z2E2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms