Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Phf1Q9Z1B8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Phf1Q9Z1B8 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.84■□□□□ 0.13
Phf1Q9Z1B8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Phf1Q9Z1B8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Phf1Q9Z1B8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Gm11539-201ENSMUST00000119837 557 ntBASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Gm13436-201ENSMUST00000120418 567 ntBASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Gm13559-201ENSMUST00000120476 863 ntBASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Gm10517-202ENSMUST00000192970 758 ntBASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Phf1Q9Z1B8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Phf1Q9Z1B8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Phf1Q9Z1B8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Phf1Q9Z1B8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms