Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Gm7638-201ENSMUST00000121348 967 ntBASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmg20bQ9Z104 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmg20bQ9Z104 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmg20bQ9Z104 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmg20bQ9Z104 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmg20bQ9Z104 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Il3ra-202ENSMUST00000223589 738 ntBASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hmg20bQ9Z104 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmg20bQ9Z104 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Gm21814-202ENSMUST00000203277 873 ntBASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmg20bQ9Z104 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Gm3375-201ENSMUST00000203929 796 ntBASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms