Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Gm10653-202ENSMUST00000139570 835 ntBASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn9Q9Z0S7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Gm10698-201ENSMUST00000182663 604 ntBASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn9Q9Z0S7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Gm24841-201ENSMUST00000158676 357 ntBASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn9Q9Z0S7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cldn9Q9Z0S7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn9Q9Z0S7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn9Q9Z0S7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn9Q9Z0S7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms