Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CcsQ9WU84 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.38□□□□□ -0.27
CcsQ9WU84 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CcsQ9WU84 Gm38205-201ENSMUST00000192243 258 ntBASIC13.38□□□□□ -0.27
CcsQ9WU84 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.38□□□□□ -0.27
CcsQ9WU84 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
CcsQ9WU84 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.38□□□□□ -0.27
CcsQ9WU84 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcsQ9WU84 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.37□□□□□ -0.27
CcsQ9WU84 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CcsQ9WU84 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.37□□□□□ -0.27
CcsQ9WU84 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CcsQ9WU84 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CcsQ9WU84 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CcsQ9WU84 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcsQ9WU84 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.36□□□□□ -0.27
CcsQ9WU84 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Gm7860-201ENSMUST00000121190 879 ntBASIC13.36□□□□□ -0.27
CcsQ9WU84 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.36□□□□□ -0.27
CcsQ9WU84 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcsQ9WU84 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CcsQ9WU84 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.35□□□□□ -0.27
CcsQ9WU84 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.35□□□□□ -0.27
CcsQ9WU84 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CcsQ9WU84 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Gm13534-201ENSMUST00000121169 513 ntBASIC13.35□□□□□ -0.27
CcsQ9WU84 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.35□□□□□ -0.27
CcsQ9WU84 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CcsQ9WU84 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CcsQ9WU84 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.35□□□□□ -0.27
CcsQ9WU84 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcsQ9WU84 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms