Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn5Q9WU28 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn5Q9WU28 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.17□□□□□ -0.14
Pfdn5Q9WU28 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn5Q9WU28 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn5Q9WU28 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn5Q9WU28 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn5Q9WU28 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Gm26833-201ENSMUST00000180899 440 ntBASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn5Q9WU28 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn5Q9WU28 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn5Q9WU28 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms