Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn8aQ9WTU3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn8aQ9WTU3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.33■□□□□ 0.36
Scn8aQ9WTU3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn8aQ9WTU3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Gm18421-201ENSMUST00000204122 625 ntBASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.31■□□□□ 0.36
Scn8aQ9WTU3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Gm33142-201ENSMUST00000193913 867 ntBASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn8aQ9WTU3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn8aQ9WTU3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms