Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40aQ9R1C7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40aQ9R1C7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40aQ9R1C7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40aQ9R1C7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Prpf40aQ9R1C7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf40aQ9R1C7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Mir1199-201ENSMUST00000117015 119 ntBASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40aQ9R1C7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Prpf40aQ9R1C7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms