Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd2Q9R1A8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Gm12933-201ENSMUST00000120203 872 ntBASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd2Q9R1A8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd2Q9R1A8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd2Q9R1A8 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.71■□□□□ 0.42
Rfwd2Q9R1A8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd2Q9R1A8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms