Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nek3Q9R0A5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nek3Q9R0A5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nek3Q9R0A5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nek3Q9R0A5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nek3Q9R0A5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Dancr-204ENSMUST00000132389 2347 ntBASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Gm4968-201ENSMUST00000071458 858 ntBASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek3Q9R0A5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek3Q9R0A5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek3Q9R0A5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek3Q9R0A5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek3Q9R0A5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nek3Q9R0A5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
Nek3Q9R0A5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek3Q9R0A5 Gm37179-201ENSMUST00000194862 823 ntBASIC18.83■□□□□ 0.6
Nek3Q9R0A5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek3Q9R0A5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek3Q9R0A5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek3Q9R0A5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nek3Q9R0A5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Gm2559-201ENSMUST00000201323 363 ntBASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.82■□□□□ 0.6
Nek3Q9R0A5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek3Q9R0A5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nek3Q9R0A5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek3Q9R0A5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek3Q9R0A5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms