Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.02■□□□□ -0
Nubp1Q9R060 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nubp1Q9R060 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.02■□□□□ -0
Nubp1Q9R060 Gm10418-201ENSMUST00000100943 576 ntBASIC15.02■□□□□ -0
Nubp1Q9R060 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Gm24589-201ENSMUST00000116692 94 ntBASIC15.02■□□□□ -0
Nubp1Q9R060 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.02■□□□□ -0
Nubp1Q9R060 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.02■□□□□ -0
Nubp1Q9R060 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nubp1Q9R060 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.02■□□□□ -0
Nubp1Q9R060 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nubp1Q9R060 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp1Q9R060 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.02□□□□□ -0.01
Nubp1Q9R060 BC021767-201ENSMUST00000126387 1716 ntBASIC15.02□□□□□ -0.01
Nubp1Q9R060 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Nubp1Q9R060 Grk6-206ENSMUST00000224995 2971 ntBASIC15.01□□□□□ -0.01
Nubp1Q9R060 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.01□□□□□ -0.01
Nubp1Q9R060 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Gm27742-201ENSMUST00000184667 60 ntBASIC15.01□□□□□ -0.01
Nubp1Q9R060 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Gm7370-201ENSMUST00000219471 767 ntBASIC15.01□□□□□ -0.01
Nubp1Q9R060 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.01□□□□□ -0.01
Nubp1Q9R060 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nubp1Q9R060 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm19439-201ENSMUST00000198195 2273 ntBASIC15□□□□□ -0.01
Nubp1Q9R060 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm25116-201ENSMUST00000157191 122 ntBASIC15□□□□□ -0.01
Nubp1Q9R060 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm7213-201ENSMUST00000215977 950 ntBASIC15□□□□□ -0.01
Nubp1Q9R060 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15□□□□□ -0.01
Nubp1Q9R060 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15□□□□□ -0.01
Nubp1Q9R060 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15□□□□□ -0.01
Nubp1Q9R060 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nubp1Q9R060 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.99□□□□□ -0.01
Nubp1Q9R060 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Gm45328-201ENSMUST00000210942 917 ntBASIC14.99□□□□□ -0.01
Nubp1Q9R060 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nubp1Q9R060 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms