Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a4Q9QZR9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gm13312-201ENSMUST00000119631 718 ntBASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gm6550-201ENSMUST00000187574 993 ntBASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Col4a4Q9QZR9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a4Q9QZR9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a4Q9QZR9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a4Q9QZR9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Gm4535-201ENSMUST00000182274 558 ntBASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Gm29707-201ENSMUST00000196325 491 ntBASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Gm9727-201ENSMUST00000161387 555 ntBASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a4Q9QZR9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms