Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom3Q9QXN0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Gm6345-202ENSMUST00000180900 204 ntBASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom3Q9QXN0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Shroom3Q9QXN0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Gm10013-201ENSMUST00000106074 672 ntBASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom3Q9QXN0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Gm27741-201ENSMUST00000185060 237 ntBASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Gm9731-201ENSMUST00000209480 747 ntBASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shroom3Q9QXN0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Gm17661-201ENSMUST00000170317 270 ntBASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms