Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh5Q9QUM7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.57■□□□□ 0.4
Msh5Q9QUM7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.56■□□□□ 0.4
Msh5Q9QUM7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Msh5Q9QUM7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.55■□□□□ 0.4
Msh5Q9QUM7 AC102523.2-201ENSMUST00000227813 983 ntBASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh5Q9QUM7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh5Q9QUM7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh5Q9QUM7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh5Q9QUM7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh5Q9QUM7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh5Q9QUM7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh5Q9QUM7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh5Q9QUM7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms