Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Gm15375-201ENSMUST00000119510 849 ntBASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Gm10698-201ENSMUST00000182663 604 ntBASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Mir6349-201ENSMUST00000184059 97 ntBASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a2Q9JLR1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Gm18666-201ENSMUST00000190039 958 ntBASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sec61a2Q9JLR1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sec61a2Q9JLR1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms