Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx5Q9JL61 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Gm27000-201ENSMUST00000182943 842 ntBASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx5Q9JL61 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Gm10231-201ENSMUST00000181584 441 ntBASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Gm10175-202ENSMUST00000208752 441 ntBASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx5Q9JL61 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Gm18959-201ENSMUST00000208954 655 ntBASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx5Q9JL61 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.14■□□□□ 0.5
Rfx5Q9JL61 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx5Q9JL61 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx5Q9JL61 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms