Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Gm13216-201ENSMUST00000117145 591 ntBASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Copb1Q9JIF7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Copb1Q9JIF7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Copb1Q9JIF7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Copb1Q9JIF7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Copb1Q9JIF7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Copb1Q9JIF7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms