Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn3Q9ES97 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn3Q9ES97 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn3Q9ES97 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Mir6349-201ENSMUST00000184059 97 ntBASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Mir8112-201ENSMUST00000184382 131 ntBASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Mir7071-201ENSMUST00000184847 69 ntBASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn3Q9ES97 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn3Q9ES97 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn3Q9ES97 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rtn3Q9ES97 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rtn3Q9ES97 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn3Q9ES97 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rtn3Q9ES97 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn3Q9ES97 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.28■□□□□ 0.52
Rtn3Q9ES97 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn3Q9ES97 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms