Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.58■□□□□ 0.24
Ube4bQ9ES00 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube4bQ9ES00 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4bQ9ES00 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4bQ9ES00 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4bQ9ES00 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms