Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb3Q9ERD7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb3Q9ERD7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb3Q9ERD7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb3Q9ERD7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tubb3Q9ERD7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms