Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf1Q9EPU4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Gm11355-201ENSMUST00000121120 306 ntBASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Gm37811-201ENSMUST00000192416 2601 ntBASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf1Q9EPU4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf1Q9EPU4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Gm9103-201ENSMUST00000119371 405 ntBASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Gm17808-201ENSMUST00000200859 894 ntBASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf1Q9EPU4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf1Q9EPU4 Gm16499-203ENSMUST00000204633 2177 ntBASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Gm44450-201ENSMUST00000199528 114 ntBASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Gm18115-201ENSMUST00000221209 621 ntBASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf1Q9EPU4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf1Q9EPU4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf1Q9EPU4 Rarb-207ENSMUST00000225921 2756 ntBASIC23.73■■□□□ 1.39
Cpsf1Q9EPU4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms