Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cdc40Q9DC48 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Timm23-208ENSMUST00000226683 750 ntBASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cdc40Q9DC48 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.97■□□□□ 0.15
Cdc40Q9DC48 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc40Q9DC48 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc40Q9DC48 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdc40Q9DC48 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdc40Q9DC48 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cdc40Q9DC48 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdc40Q9DC48 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdc40Q9DC48 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdc40Q9DC48 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdc40Q9DC48 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.94■□□□□ 0.14
Cdc40Q9DC48 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdc40Q9DC48 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms