Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp8Q9DB85 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rrp8Q9DB85 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rrp8Q9DB85 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rrp8Q9DB85 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp8Q9DB85 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Rrp8Q9DB85 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.81■□□□□ 0.28
Rrp8Q9DB85 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Fst-202ENSMUST00000223640 2612 ntBASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.8■□□□□ 0.28
Rrp8Q9DB85 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms