Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2aQ9DB34 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp2aQ9DB34 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp2aQ9DB34 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Mir8112-201ENSMUST00000184382 131 ntBASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2aQ9DB34 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2aQ9DB34 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Gm24841-201ENSMUST00000158676 357 ntBASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2aQ9DB34 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.92■□□□□ 0.46
Chmp2aQ9DB34 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2aQ9DB34 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms