Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Gm7791-201ENSMUST00000219066 539 ntBASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Il3ra-202ENSMUST00000223589 738 ntBASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssmem1Q9D9Y8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssmem1Q9D9Y8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.84□□□□□ -0.03
Ssmem1Q9D9Y8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssmem1Q9D9Y8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssmem1Q9D9Y8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssmem1Q9D9Y8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssmem1Q9D9Y8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ssmem1Q9D9Y8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gm13836-201ENSMUST00000121159 501 ntBASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gm2274-201ENSMUST00000184539 609 ntBASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gm7889-201ENSMUST00000185591 958 ntBASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Gm9987-201ENSMUST00000069768 567 ntBASIC14.83□□□□□ -0.04
Ssmem1Q9D9Y8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms